Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015172.1 Corchorus capsularis cultivar CVL-1 contig15193, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17073

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--115
34
3.5
33
82
3
124
14
32
36
16
1.89
6109--6148
14
2.7
16
88
11
59
30
0
0
70
0.88
7277--7352
31
2.5
31
91
0
125
31
26
22
19
1.98
11437--11516
42
1.9
42
86
0
115
20
31
17
31
1.95
14377--14465
31
2.9
31
81
0
88
19
21
24
34
1.96
15092--16784
331
5.2
330
83
4
1936
32
14
17
35
1.90
15072--16784
662
2.6
659
84
3
2151
32
14
17
35
1.90
16631--16936
156
2.0
155
84
0
405
27
18
18
35
1.95

Tables:   1

The End!