Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015176.1 Corchorus capsularis cultivar CVL-1 contig15197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17860

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--1773
332
4.6
331
87
3
2146
31
15
16
36
1.90
2321--2355
16
2.2
16
94
0
61
45
11
17
25
1.81
2337--4318
26
77.7
25
82
9
1922
33
24
15
26
1.95
3634--3706
16
5.3
16
65
34
62
34
20
16
28
1.94
3837--3914
39
2.0
39
85
5
104
34
24
15
25
1.95
3785--3966
91
2.0
91
89
2
276
33
25
15
25
1.95
3811--3940
65
2.0
65
90
3
208
33
25
15
25
1.95
4086--4126
20
2.0
20
90
9
66
34
31
14
19
1.92
4294--4416
35
3.6
35
89
5
180
34
23
16
26
1.95
17773--17860
2
44.0
2
100
0
176
50
0
50
0
1.00

Tables:   1

The End!