Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015184.1 Corchorus capsularis cultivar CVL-1 contig15205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  147303

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1494--1520
9
3.0
9
100
0
54
11
33
33
22
1.89
22668--22698
6
5.2
6
100
0
62
51
16
0
32
1.44
54044--54193
75
2.0
75
98
0
291
54
5
7
33
1.51
60982--61024
3
14.3
3
100
0
86
0
32
0
67
0.91
72851--72936
33
2.6
33
88
0
136
12
8
50
29
1.69
73311--73363
24
2.2
24
82
0
61
22
28
26
22
1.99
73322--73385
24
2.7
24
77
0
65
26
28
28
17
1.97
76024--76051
6
4.7
6
100
0
56
35
28
0
35
1.58
87303--87329
7
3.9
7
100
0
54
0
40
29
29
1.57
88976--89000
2
12.5
2
100
0
50
0
48
0
52
1.00
93928--93966
3
12.7
3
94
5
69
33
0
0
66
0.92
95513--95577
31
2.1
31
100
0
130
38
23
6
32
1.79
131458--131496
2
19.5
2
100
0
78
51
48
0
0
1.00
131740--131822
28
3.0
28
100
0
166
45
10
14
28
1.78
139161--139204
20
2.2
20
100
0
88
40
9
20
29
1.83
141084--141126
21
2.0
21
100
0
86
41
9
30
18
1.82

Tables:   1

The End!