Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015186.1 Corchorus capsularis cultivar CVL-1 contig15207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4346

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--1132
337
3.2
333
77
5
1187
36
16
15
31
1.90
847--1424
298
1.9
298
79
4
630
36
15
14
32
1.88
1145--4345
334
9.6
331
78
5
3176
36
16
15
31
1.90
1145--4265
669
4.7
664
88
3
4015
36
16
15
31
1.90

Tables:   1

The End!