Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015188.1 Corchorus capsularis cultivar CVL-1 contig15209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45796

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8423--8456
4
8.5
4
93
0
59
23
0
2
73
0.97
8648--8686
6
6.5
6
87
0
51
82
0
17
0
0.68
8649--8686
18
2.2
17
90
4
58
81
0
18
0
0.69
8953--8989
11
3.3
12
82
17
53
48
0
0
51
1.00
8952--8998
19
2.4
19
79
13
51
48
0
4
46
1.21
8953--8989
2
20.0
2
84
15
53
48
0
0
51
1.00
9140--9165
10
2.6
10
100
0
52
23
26
19
30
1.98
9217--9257
16
2.6
16
92
0
64
41
36
14
7
1.74
10030--10072
16
2.7
16
81
0
59
51
39
6
2
1.42
21826--21887
31
2.0
31
100
0
124
58
6
3
32
1.40
26203--26242
7
5.7
7
96
0
62
82
12
5
0
0.82
29616--29658
2
21.5
2
100
0
86
51
0
48
0
1.00
36813--37121
120
2.6
120
92
1
503
10
30
17
42
1.83
41705--41737
13
2.7
12
90
9
57
0
9
0
90
0.44
45528--45556
13
2.1
14
93
6
51
82
3
0
13
0.79

Tables:   1

The End!