Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015192.1 Corchorus capsularis cultivar CVL-1 contig15213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21203

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12234--12359
35
3.6
36
82
7
145
26
32
12
27
1.93
12723--13215
72
6.9
71
86
5
609
22
27
18
31
1.97
12725--13215
144
3.4
145
87
4
701
22
27
18
30
1.97
12719--13215
216
2.3
216
86
3
698
22
27
18
31
1.97
13995--14032
20
1.9
20
94
0
67
31
15
34
18
1.92
16149--16255
42
2.6
42
80
4
121
42
28
8
20
1.81
17734--17945
109
2.0
108
89
3
331
47
9
10
32
1.70
18793--18920
67
1.9
68
91
4
215
22
17
10
49
1.77
19180--19220
20
2.0
21
90
4
66
39
19
7
34
1.80

Tables:   1

The End!