Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015203.1 Corchorus capsularis cultivar CVL-1 contig15224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20351

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5581--5614
16
2.1
17
88
5
52
47
2
14
35
1.60
9401--9476
29
2.7
30
69
17
72
69
3
11
14
1.31
12442--12468
13
2.1
13
100
0
54
25
22
0
51
1.48
12203--12711
269
1.9
269
95
0
919
35
10
7
46
1.66
16078--16111
14
2.4
14
100
0
68
20
5
29
44
1.75
15991--16202
119
1.8
116
84
9
295
37
9
17
34
1.84
16106--16231
69
1.9
66
81
5
153
38
7
20
33
1.80
15925--16497
22
25.6
22
69
16
200
35
10
17
36
1.84
16343--16496
64
2.4
64
82
10
179
35
8
14
41
1.77

Tables:   1

The End!