Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01015204.1 Corchorus capsularis cultivar CVL-1 contig15225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 74926
ACGTcount: A:0.32, C:0.19, G:0.18, T:0.32
Found at i:4660 original size:11 final size:10
Alignment explanation
Indices: 4642--4675 Score: 50
Period size: 11 Copynumber: 3.2 Consensus size: 10
4632 GAAGTTCGTG
4642 TTTTGAAGAT
1 TTTTGAAGAT
4652 TTCTTGAAGAT
1 TT-TTGAAGAT
4663 ATTTTGAAGAT
1 -TTTTGAAGAT
4674 TT
1 TT
4676 GAAGATAATT
Statistics
Matches: 22, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
10 4 0.18
11 16 0.73
12 2 0.09
ACGTcount: A:0.29, C:0.03, G:0.18, T:0.50
Consensus pattern (10 bp):
TTTTGAAGAT
Found at i:16568 original size:32 final size:32
Alignment explanation
Indices: 16524--16664 Score: 107
Period size: 26 Copynumber: 4.8 Consensus size: 32
16514 GGGACTTATG
*
16524 AATGCCCATGTGTTTGAAGACTTTTTGATAGA
1 AATGCCCATGTGTTTGAGGACTTTTTGATAGA
16556 AATGCCTC-TGTGTTT-AGGGAC---TT-AT-G-
1 AATGCC-CATGTGTTTGA-GGACTTTTTGATAGA
16582 AATGCCCATGTGTTTGAGGACTTTTTGATAGA
1 AATGCCCATGTGTTTGAGGACTTTTTGATAGA
*
16614 GATGCCTC-TGTGTTT-AGGGAC---TT-AT-G-
1 AATGCC-CATGTGTTTGA-GGACTTTTTGATAGA
*
16640 AATGCCCAGGTGTTTGAGGACTTTT
1 AATGCCCATGTGTTTGAGGACTTTT
16665 GAGAGATGTC
Statistics
Matches: 88, Mismatches: 4, Indels: 37
0.68 0.03 0.29
Matches are distributed among these distances:
25 2 0.02
26 32 0.36
27 4 0.05
28 4 0.05
29 7 0.08
30 2 0.02
31 3 0.03
32 32 0.36
33 2 0.02
ACGTcount: A:0.22, C:0.14, G:0.26, T:0.38
Consensus pattern (32 bp):
AATGCCCATGTGTTTGAGGACTTTTTGATAGA
Found at i:16577 original size:58 final size:56
Alignment explanation
Indices: 16444--16719 Score: 403
Period size: 58 Copynumber: 4.9 Consensus size: 56
16434 GAAGAAAAAT
* * * *
16444 TGCCTTTGTGTTTAGGGACTTATGAATTGCCCTTGTGTTTGAGTAC-TTTCGAGAGA
1 TGCCTCTGTGTTTAGGGACTTATGAA-TGCCCATGTGTTTGAGGACTTTTTGAGAGA
* *
16500 TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAAGACTTTTTGATAGAAA
1 TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAGGACTTTTTG--AGAGA
16558 TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAGGACTTTTTGATAGAGA
1 TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAGGACTTTTTG--AGAGA
*
16616 TGCCTCTGTGTTTAGGGACTTATGAATGCCCAGGTGTTTGAGGAC-TTTTGAGAGA
1 TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAGGACTTTTTGAGAGA
* *
16671 TGTCTCTGTGTTTAGGGACTTATGAATTGCCCTTGTGTTTGAGGACTTT
1 TGCCTCTGTGTTTAGGGACTTATGAA-TGCCCATGTGTTTGAGGACTTT
16720 AATTATTGGG
Statistics
Matches: 203, Mismatches: 12, Indels: 9
0.91 0.05 0.04
Matches are distributed among these distances:
55 46 0.23
56 46 0.23
57 7 0.03
58 104 0.51
ACGTcount: A:0.20, C:0.14, G:0.27, T:0.39
Consensus pattern (56 bp):
TGCCTCTGTGTTTAGGGACTTATGAATGCCCATGTGTTTGAGGACTTTTTGAGAGA
Found at i:16858 original size:48 final size:48
Alignment explanation
Indices: 16787--16882 Score: 192
Period size: 48 Copynumber: 2.0 Consensus size: 48
16777 CCCAATATTT
16787 GTGTGTGTGTTTGGGTTAGGCCAAAGAGATATATGTGTGAGTGGGATA
1 GTGTGTGTGTTTGGGTTAGGCCAAAGAGATATATGTGTGAGTGGGATA
16835 GTGTGTGTGTTTGGGTTAGGCCAAAGAGATATATGTGTGAGTGGGATA
1 GTGTGTGTGTTTGGGTTAGGCCAAAGAGATATATGTGTGAGTGGGATA
16883 AAAATTGGCC
Statistics
Matches: 48, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
48 48 1.00
ACGTcount: A:0.23, C:0.04, G:0.40, T:0.33
Consensus pattern (48 bp):
GTGTGTGTGTTTGGGTTAGGCCAAAGAGATATATGTGTGAGTGGGATA
Found at i:18164 original size:51 final size:51
Alignment explanation
Indices: 18099--18200 Score: 168
Period size: 51 Copynumber: 2.0 Consensus size: 51
18089 TAATTGTAAT
* *
18099 GATAATTGATTTTGCGTAGCTTATAGTTGTTGTATTTGCTATGGACATCGG
1 GATAATTGATTTTGCGTAGCTTATAGCTATTGTATTTGCTATGGACATCGG
* *
18150 GATAGTTGATTTTGCGTAGCTTATAGCTATTGTATTTGCTATGGATATCGG
1 GATAATTGATTTTGCGTAGCTTATAGCTATTGTATTTGCTATGGACATCGG
18201 AAGTATAGAA
Statistics
Matches: 47, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
51 47 1.00
ACGTcount: A:0.22, C:0.10, G:0.25, T:0.43
Consensus pattern (51 bp):
GATAATTGATTTTGCGTAGCTTATAGCTATTGTATTTGCTATGGACATCGG
Found at i:23189 original size:2 final size:2
Alignment explanation
Indices: 23182--23207 Score: 52
Period size: 2 Copynumber: 13.0 Consensus size: 2
23172 AACATAACCC
23182 AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT
23208 TATTCCATAA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 24 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:23567 original size:28 final size:29
Alignment explanation
Indices: 23487--23567 Score: 101
Period size: 29 Copynumber: 2.8 Consensus size: 29
23477 GCTTAATACC
* *
23487 CAAATTAACCCCTTAACTATCTATTTTGGGA
1 CAAATTGACCCCTTAACT-T-TTTTTTGGGA
*
23518 CAAATTGACCCCTTAACTTTTTTTTGTGA
1 CAAATTGACCCCTTAACTTTTTTTTGGGA
*
23547 CAAATTGGCCCCTTAA-TTTTT
1 CAAATTGACCCCTTAACTTTTT
23568 AAAAATGAGA
Statistics
Matches: 46, Mismatches: 4, Indels: 3
0.87 0.08 0.06
Matches are distributed among these distances:
28 5 0.11
29 23 0.50
30 1 0.02
31 17 0.37
ACGTcount: A:0.27, C:0.22, G:0.10, T:0.41
Consensus pattern (29 bp):
CAAATTGACCCCTTAACTTTTTTTTGGGA
Found at i:24277 original size:31 final size:31
Alignment explanation
Indices: 24228--24287 Score: 77
Period size: 31 Copynumber: 1.9 Consensus size: 31
24218 TCACGTTTTT
* * *
24228 AAAAGTTAAGGAGTCAATTTGTCCGAAAAAA
1 AAAAGTTAAGGAGCCAATTTATCCCAAAAAA
24259 AAAAGTTAAGG-GACCAATTTATCCCAAAA
1 AAAAGTTAAGGAG-CCAATTTATCCCAAAA
24288 TGGATAGTTA
Statistics
Matches: 25, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
30 1 0.04
31 24 0.96
ACGTcount: A:0.48, C:0.13, G:0.17, T:0.22
Consensus pattern (31 bp):
AAAAGTTAAGGAGCCAATTTATCCCAAAAAA
Found at i:34235 original size:2 final size:2
Alignment explanation
Indices: 34228--34257 Score: 60
Period size: 2 Copynumber: 15.0 Consensus size: 2
34218 TTATAATTAG
34228 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
34258 ACTAGATTTT
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 28 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:34457 original size:413 final size:406
Alignment explanation
Indices: 33872--34660 Score: 1119
Period size: 414 Copynumber: 1.9 Consensus size: 406
33862 CTGGCACATT
*
33872 CACTTCGTGAATGCAATTATATTTGTACAAAATACAATTATTTATTCTTTTAGGAATTTTAAAAT
1 CACTCCGTGAATGCAATTATATTTGTACAAAATACAATTATTTATTCTTTTAGGAATTTTAAAAT
*
33937 AAACACTTTATATTTCTTTTAAAATTAAATTTATAGATAATAAATAGTTGGTAGTTTTTTCTTTG
66 AAACACTTTATATTTCTTTTAAAATTAAATCTATAGATAATAAATAGTTGGTAGTTTTTTCTTTG
34002 AAAAGTTAGTGGTAGTTTCTTTTATAATTAATTAAGTTTGGGGTGGTTTTATTTTCAAATGGATA
131 AAAAGTTAGTGGTAGTTTC-TTTATAATT-ATTAAGTTTGGGGTGGTTTTATTTTCAAATGGATA
** * *
34067 G-TTTTTATCTTAAAAAAGTTTCAAAATACATTTTTACCCTTTAATTGGTGATTTTCTTTTATAT
194 GTTTTTTATCTTAAAAAAGTCACAAAATACATTTTTACCCTTTAATTGGTGATTTTCTTTCAAAT
*
34131 TGGTAGTTTTAATTTTTGGTATTTAAGTATTTTGTTAACTGAGTTTGTCTCCCGAGTCAACTTGT
259 TGGTAGTTTTAATTTTTGGTATTTAAGTATTTTGTTAACTGAGTTTGTCT-CCGAGTCAACTCGT
* *
34196 GAGACAAACTCAG-GACTTCACATTATAATTAGTATATATATATATATATATATATATATATAAC
323 GAGACAAACTCAGAGAC-TCACATTATAATTAGTATAGAT-TATAGATATATATATATATATAAC
34260 TAGATTTTGGCACATTCACTC
386 TAGATTTTGGCACATTCACTC
* * * *
34281 CACTCCGTGAATGCAATTATATTTGTAGAAAATACAGTTATTAACTATATCTTTTATGAATTTTT
1 CACTCCGTGAATGCAATTATATTTGTACAAAATACAATTATT---TAT-TCTTTTAGGAATTTTA
* *
34346 AAATAAATACTTTCACATGTATTTCTTTTTAAAATTAAATCTGTAGATAAGTAAAT-GATT-G-A
62 AAATAAACACTTT---A--TATTTC-TTTTAAAATTAAATCTATAGATAA-TAAATAG-TTGGTA
* * *
34408 -TTTTTTTTTTGAAAAGTTAGTGGTAGTTTC-TTATGGA-T-TTAAGTTTGGGGTGGTTTTCTTT
119 GTTTTTTCTTTGAAAAGTTAGTGGTAGTTTCTTTAT-AATTATTAAGTTTGGGGTGGTTTTATTT
* * *
34469 TCAAATGGATAGTTTTTTATTTTTAAAAAGTCACTAAATACATTTTTACCCTTTAATTGGTGATT
183 TCAAATGGATAGTTTTTTATCTTAAAAAAGTCACAAAATACATTTTTACCCTTTAATTGGTGATT
* *
34534 TTGTTTCAAATTGTTAGTTTTAATTTTTGGTATTTAAGTATTTTGTTAACTGAGTTTGTCTCCGA
248 TTCTTTCAAATTGGTAGTTTTAATTTTTGGTATTTAAGTATTTTGTTAACTGAGTTTGTCTCCGA
* * *
34599 GTTAACTCGTGAGACAAACTCAGAGGCTCACATTATAATTATTATAGATTATAGATATATAT
313 GTCAACTCGTGAGACAAACTCAGAGACTCACATTATAATTAGTATAGATTATAGATATATAT
34661 GGAAAAAGAA
Statistics
Matches: 339, Mismatches: 26, Indels: 27
0.86 0.07 0.07
Matches are distributed among these distances:
409 39 0.12
412 15 0.04
413 105 0.31
414 106 0.31
415 5 0.01
416 2 0.01
417 29 0.09
418 7 0.02
419 24 0.07
420 7 0.02
ACGTcount: A:0.32, C:0.09, G:0.14, T:0.46
Consensus pattern (406 bp):
CACTCCGTGAATGCAATTATATTTGTACAAAATACAATTATTTATTCTTTTAGGAATTTTAAAAT
AAACACTTTATATTTCTTTTAAAATTAAATCTATAGATAATAAATAGTTGGTAGTTTTTTCTTTG
AAAAGTTAGTGGTAGTTTCTTTATAATTATTAAGTTTGGGGTGGTTTTATTTTCAAATGGATAGT
TTTTTATCTTAAAAAAGTCACAAAATACATTTTTACCCTTTAATTGGTGATTTTCTTTCAAATTG
GTAGTTTTAATTTTTGGTATTTAAGTATTTTGTTAACTGAGTTTGTCTCCGAGTCAACTCGTGAG
ACAAACTCAGAGACTCACATTATAATTAGTATAGATTATAGATATATATATATATATAACTAGAT
TTTGGCACATTCACTC
Found at i:34983 original size:56 final size:56
Alignment explanation
Indices: 34876--34984 Score: 166
Period size: 57 Copynumber: 1.9 Consensus size: 56
34866 AAAAATACTG
*
34876 TAAGATAGAACTGATCCTAATCTTTTTTTTTTTGTTAGTAAAATTTTGTACACATAA
1 TAAGATAGAACTGATCCTAATCCTTTTTTTTTTG-TAGTAAAATTTTGTACACATAA
* *
34933 TAAGATAGAATTGATCTTAATTCCTTTTTTTTTTG-AGTAAAATTTTGTACAC
1 TAAGATAGAACTGATCCTAA-TCCTTTTTTTTTTGTAGTAAAATTTTGTACAC
34985 TGAATATTTT
Statistics
Matches: 48, Mismatches: 3, Indels: 3
0.89 0.06 0.06
Matches are distributed among these distances:
56 17 0.35
57 18 0.38
58 13 0.27
ACGTcount: A:0.32, C:0.10, G:0.11, T:0.47
Consensus pattern (56 bp):
TAAGATAGAACTGATCCTAATCCTTTTTTTTTTGTAGTAAAATTTTGTACACATAA
Found at i:36435 original size:2 final size:2
Alignment explanation
Indices: 36428--36452 Score: 50
Period size: 2 Copynumber: 12.5 Consensus size: 2
36418 ATGAAACTAA
36428 TG TG TG TG TG TG TG TG TG TG TG TG T
1 TG TG TG TG TG TG TG TG TG TG TG TG T
36453 CTCTCTCTCT
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 23 1.00
ACGTcount: A:0.00, C:0.00, G:0.48, T:0.52
Consensus pattern (2 bp):
TG
Found at i:40460 original size:16 final size:17
Alignment explanation
Indices: 40427--40460 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 17
40417 TACCAATAGG
40427 AGAAAGCAAAAAATGAA
1 AGAAAGCAAAAAATGAA
*
40444 AGAAATCAAAAAA-GAA
1 AGAAAGCAAAAAATGAA
40460 A
1 A
40461 ATGATATGGA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
16 4 0.25
17 12 0.75
ACGTcount: A:0.74, C:0.06, G:0.15, T:0.06
Consensus pattern (17 bp):
AGAAAGCAAAAAATGAA
Found at i:45756 original size:25 final size:25
Alignment explanation
Indices: 45722--45771 Score: 100
Period size: 25 Copynumber: 2.0 Consensus size: 25
45712 CAAAAATAAG
45722 AGAGTTGCCACTTGCCATTGTTGGT
1 AGAGTTGCCACTTGCCATTGTTGGT
45747 AGAGTTGCCACTTGCCATTGTTGGT
1 AGAGTTGCCACTTGCCATTGTTGGT
45772 TCTCGCAAAT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 25 1.00
ACGTcount: A:0.16, C:0.20, G:0.28, T:0.36
Consensus pattern (25 bp):
AGAGTTGCCACTTGCCATTGTTGGT
Found at i:46840 original size:4 final size:4
Alignment explanation
Indices: 46822--46855 Score: 52
Period size: 4 Copynumber: 8.8 Consensus size: 4
46812 ACTCATCAAA
*
46822 AAAG AAA- AAAA AAAG AAAG AAAG AAAG AAAG AAA
1 AAAG AAAG AAAG AAAG AAAG AAAG AAAG AAAG AAA
46856 AGAACACAAT
Statistics
Matches: 28, Mismatches: 1, Indels: 2
0.90 0.03 0.06
Matches are distributed among these distances:
3 3 0.11
4 25 0.89
ACGTcount: A:0.82, C:0.00, G:0.18, T:0.00
Consensus pattern (4 bp):
AAAG
Found at i:46848 original size:12 final size:12
Alignment explanation
Indices: 46819--46856 Score: 60
Period size: 12 Copynumber: 3.2 Consensus size: 12
46809 CCAACTCATC
46819 AAAAAAGAAA-A
1 AAAAAAGAAAGA
46830 AAAAAAGAAAGA
1 AAAAAAGAAAGA
*
46842 AAGAAAGAAAGA
1 AAAAAAGAAAGA
46854 AAA
1 AAA
46857 GAACACAATT
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
11 10 0.42
12 14 0.58
ACGTcount: A:0.84, C:0.00, G:0.16, T:0.00
Consensus pattern (12 bp):
AAAAAAGAAAGA
Found at i:61104 original size:15 final size:15
Alignment explanation
Indices: 61086--61125 Score: 53
Period size: 15 Copynumber: 2.6 Consensus size: 15
61076 GATTATCAGA
* *
61086 GTTCGGGTTATTCGG
1 GTTCGGGTCATACGG
61101 GTTCGGGTCATACGG
1 GTTCGGGTCATACGG
61116 GTTCTGGGTC
1 GTTC-GGGTC
61126 TCGGGTCTAC
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
15 17 0.77
16 5 0.23
ACGTcount: A:0.07, C:0.17, G:0.40, T:0.35
Consensus pattern (15 bp):
GTTCGGGTCATACGG
Found at i:70480 original size:41 final size:41
Alignment explanation
Indices: 70435--70749 Score: 456
Period size: 41 Copynumber: 7.7 Consensus size: 41
70425 ATTTTCGTTT
* *
70435 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTACCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
**
70476 ATTCAAGATTGAGTCATCGAGACCCTTGAATTAAATTATC-
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
*
70516 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
** *
70557 ATTCAAGATTGAGTCATCGAGACACTTGAATTAAATTATCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
*
70598 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
** * * *
70639 ATTCAAGATTGAGTCATCGAAACCCTTGAATTAAGTCATCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
* *
70680 ATTCAAGATCAAGTCGTCAAGACCCTTGAATTAAATTATCA
1 ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
70721 ATTCAAGATCAAGTCATTC--GACCCTTGAA
1 ATTCAAGATCAAGTCA-TCGAGACCCTTGAA
70750 GCAGAATTTT
Statistics
Matches: 243, Mismatches: 29, Indels: 5
0.88 0.10 0.02
Matches are distributed among these distances:
40 47 0.19
41 194 0.80
42 2 0.01
ACGTcount: A:0.39, C:0.19, G:0.13, T:0.29
Consensus pattern (41 bp):
ATTCAAGATCAAGTCATCGAGACCCTTGAATTAAATTATCA
Found at i:70737 original size:82 final size:82
Alignment explanation
Indices: 70435--70729 Score: 511
Period size: 82 Copynumber: 3.6 Consensus size: 82
70425 ATTTTCGTTT
*
70435 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTACCAATTCAAGATTGAGTCATCGAGACC
1 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAGACC
70500 CTTGAATTAAATTATC-
66 CTTGAATTAAATTATCA
*
70516 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAGACA
1 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAGACC
70581 CTTGAATTAAATTATCA
66 CTTGAATTAAATTATCA
*
70598 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAAACC
1 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAGACC
* *
70663 CTTGAATTAAGTCATCA
66 CTTGAATTAAATTATCA
* * *
70680 ATTCAAGATCAAGTCGTCAAGACCCTTGAATTAAATTATCAATTCAAGAT
1 ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGAT
70730 CAAGTCATTC
Statistics
Matches: 204, Mismatches: 9, Indels: 1
0.95 0.04 0.00
Matches are distributed among these distances:
81 79 0.39
82 125 0.61
ACGTcount: A:0.39, C:0.19, G:0.13, T:0.29
Consensus pattern (82 bp):
ATTCAAGAACAAGTCATCGAGACCCTTGAATTAAATTATCAATTCAAGATTGAGTCATCGAGACC
CTTGAATTAAATTATCA
Done.