Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015206.1 Corchorus capsularis cultivar CVL-1 contig15227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37716

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
416--452
15
2.5
15
80
20
51
51
0
0
48
1.00
5653--5717
31
2.1
31
94
0
112
41
21
18
18
1.90
6350--6380
15
2.1
15
93
0
53
25
0
41
32
1.56
9277--9312
2
17.5
2
88
5
54
52
2
0
44
1.15
13239--13283
23
1.9
24
90
4
74
51
15
17
15
1.77
16332--16441
54
2.0
54
100
0
220
25
22
7
44
1.78
16671--16760
39
2.3
39
96
0
162
41
18
4
35
1.71
18203--18272
31
2.2
32
89
2
106
24
27
0
48
1.51
20700--20792
46
2.0
46
95
0
168
41
33
3
21
1.69
30712--30816
31
3.4
31
85
0
120
42
18
6
32
1.76
33037--33270
116
2.0
116
92
3
391
38
17
13
30
1.88
35530--35606
23
3.3
23
72
13
77
46
9
3
40
1.54
35810--35900
21
4.3
21
84
2
112
29
23
13
34
1.92
36436--36476
21
2.0
21
95
0
73
41
31
2
24
1.68

Tables:   1

The End!