Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015207.1 Corchorus capsularis cultivar CVL-1 contig15228, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10250

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4754--4812
31
1.9
31
85
0
82
32
18
5
44
1.72
5550--5761
109
2.0
104
86
4
289
35
10
7
46
1.66
6747--6784
11
3.5
11
89
10
51
39
0
2
57
1.12
7100--7134
18
1.9
18
88
0
52
37
20
8
34
1.83
7974--8001
11
2.5
11
100
0
56
85
0
0
14
0.59
8163--8217
12
4.5
12
90
4
83
29
21
14
34
1.93
8644--8678
17
2.1
17
94
0
61
28
17
20
34
1.95
8668--8707
20
2.0
21
90
5
64
20
35
7
37
1.81
8778--8834
25
2.3
25
87
0
78
31
29
1
36
1.68

Tables:   1

The End!