Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015210.1 Corchorus capsularis cultivar CVL-1 contig15231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43983

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1705--1784
31
2.5
32
93
4
135
57
11
6
25
1.56
1715--1766
16
3.3
16
67
5
52
57
13
5
23
1.57
3670--3737
31
2.3
29
82
5
82
26
14
23
35
1.94
4293--4326
6
5.5
6
93
6
59
35
47
0
17
1.48
17866--17966
51
2.0
50
86
1
139
45
15
8
29
1.77
17935--17969
16
2.1
17
89
5
54
31
14
11
42
1.81
19047--19089
22
2.0
22
90
0
68
39
37
18
4
1.72
20584--20626
22
2.0
22
100
0
86
51
4
23
20
1.66
20753--20824
15
4.6
16
75
6
76
27
29
16
26
1.97
23351--23377
1
27.0
1
100
0
54
100
0
0
0
0.00
40131--40167
17
2.1
18
95
5
67
27
35
10
27
1.90

Tables:   1

The End!