Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015212.1 Corchorus capsularis cultivar CVL-1 contig15233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14209

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1196--1298
22
4.7
22
69
9
68
36
7
11
43
1.70
2874--2930
14
4.3
14
83
14
68
42
15
7
35
1.75
7083--7111
13
2.1
14
93
6
51
48
10
20
20
1.79
10183--10234
27
1.9
27
96
0
95
38
21
21
19
1.94
10282--10314
2
17.5
2
87
12
52
48
0
0
51
1.00
11001--11072
35
2.1
35
84
5
92
29
1
33
36
1.66
11127--11163
2
18.5
2
88
0
56
2
45
2
48
1.30
11166--11205
2
20.0
2
89
0
62
45
0
5
50
1.23
13337--13395
30
2.0
30
86
6
84
23
28
16
30
1.97
13806--13910
33
3.2
33
74
8
106
47
19
9
23
1.78

Tables:   1

The End!