Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015213.1 Corchorus capsularis cultivar CVL-1 contig15234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28507

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11307--11337
14
2.2
14
94
0
53
80
9
0
9
0.90
11703--11735
16
2.1
15
94
5
57
66
0
27
6
1.15
13666--13769
16
6.6
16
88
3
158
6
14
38
40
1.72
13666--13769
31
3.3
31
87
2
163
6
14
38
40
1.72
13727--13812
6
13.5
6
73
20
59
3
19
44
32
1.68
13680--13787
47
2.2
48
86
3
146
6
14
38
39
1.72
13759--13791
17
1.9
17
93
0
57
3
21
48
27
1.64
13758--13812
23
2.4
23
93
0
92
1
23
47
27
1.62
14591--14631
16
2.6
16
92
0
64
7
12
39
41
1.70
15782--16620
35
24.7
33
80
13
801
32
18
8
39
1.82
15782--16620
66
12.4
65
80
12
824
32
18
8
39
1.82
16321--16386
27
2.4
27
94
0
114
34
15
9
40
1.78
16348--16629
69
4.0
71
87
6
380
33
16
7
42
1.77
16346--16629
104
2.7
107
93
4
479
33
16
7
41
1.77
18319--18357
20
2.0
20
94
0
69
20
20
17
41
1.91
23894--23950
30
1.9
30
85
0
78
35
7
15
42
1.75
25943--25973
15
2.1
15
93
0
53
19
16
0
64
1.29
25901--25973
24
2.9
24
77
6
65
19
20
1
58
1.46
26232--26271
17
2.5
16
84
11
55
17
17
0
65
1.28
26232--26265
15
2.3
14
90
10
50
17
17
0
64
1.29
26536--26672
37
3.6
37
78
13
134
26
21
7
45
1.77

Tables:   1

The End!