Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015216.1 Corchorus capsularis cultivar CVL-1 contig15237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13119

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
752--784
17
1.9
17
100
0
66
30
36
6
27
1.81
3717--3755
19
2.1
18
85
4
51
58
0
2
38
1.12
6630--6991
179
2.0
181
91
3
597
46
14
12
26
1.79
6203--7427
619
2.0
623
84
3
1601
43
17
12
26
1.85
7758--7811
24
2.2
24
90
6
83
11
5
29
53
1.59
7758--7821
21
2.9
22
86
6
76
14
6
29
50
1.67
9929--10018
29
3.0
29
79
9
76
6
5
8
78
1.07
11114--11172
16
3.7
16
80
8
59
6
15
38
38
1.74
12732--12768
2
19.0
2
94
5
67
48
0
0
51
1.00

Tables:   1

The End!