Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015227.1 Corchorus capsularis cultivar CVL-1 contig15248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44084

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3349--3390
17
2.4
18
84
7
61
76
0
23
0
0.79
4371--4435
34
1.9
34
83
0
85
24
21
16
36
1.94
4811--4932
35
3.5
35
77
2
127
18
17
25
38
1.92
4802--4969
71
2.4
71
83
6
198
19
17
26
36
1.94
4915--5003
34
2.6
34
80
7
99
15
19
26
38
1.92
5768--5805
14
2.9
13
85
11
51
18
0
13
68
1.21
5775--5820
7
6.9
7
82
9
60
15
2
13
69
1.28
9666--9700
1
35.0
1
88
0
52
94
2
2
0
0.37
10956--10996
7
5.9
7
97
0
73
85
14
0
0
0.60
13838--14080
35
6.7
35
82
10
258
39
10
16
32
1.83
13913--14080
71
2.4
70
85
9
227
39
9
16
33
1.81
20413--20443
15
2.0
16
93
6
55
38
6
0
54
1.26
21146--21183
20
2.0
20
89
5
60
57
0
7
34
1.28
21205--21263
29
2.0
30
87
9
86
45
5
3
45
1.42
21484--21531
21
2.2
21
82
10
53
52
4
18
25
1.63

Tables:   1

The End!