Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015233.1 Corchorus capsularis cultivar CVL-1 contig15254, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23593

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
369--403
2
17.5
2
100
0
70
48
0
0
51
1.00
732--877
75
1.9
75
90
0
229
19
19
17
42
1.89
1431--1460
2
15.0
2
100
0
60
50
0
0
50
1.00
2567--2596
2
15.5
2
93
6
53
50
0
0
50
1.00
9924--9950
12
2.2
12
100
0
54
22
11
40
25
1.87
13297--13462
35
4.7
35
81
4
174
26
33
17
22
1.96
13877--14053
72
2.5
71
85
1
230
23
28
16
31
1.97

Tables:   1

The End!