Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015235.1 Corchorus capsularis cultivar CVL-1 contig15256, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36192

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4377--4466
30
3.0
32
73
16
93
36
1
36
25
1.64
5781--5811
2
15.0
2
93
6
53
48
0
3
48
1.17
16392--16436
22
2.0
22
100
0
90
68
8
8
13
1.38
18030--18074
17
2.6
17
96
0
81
24
13
4
57
1.54
18390--18422
6
5.7
6
96
3
59
54
12
0
33
1.37
19339--19363
10
2.5
10
100
0
50
24
8
20
48
1.76
22321--22345
12
2.1
12
100
0
50
12
24
0
64
1.27
28201--28238
11
3.5
11
89
10
51
39
0
2
57
1.12
30655--30697
11
3.9
11
90
0
68
46
6
4
41
1.51
30651--30697
22
2.1
22
96
0
85
46
6
4
42
1.48
32230--32264
17
2.1
17
100
0
70
60
11
0
28
1.32
32246--32316
13
5.2
13
76
17
63
57
12
1
28
1.44
32245--32325
42
1.9
43
94
2
146
58
11
1
29
1.41

Tables:   1

The End!