Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015238.1 Corchorus capsularis cultivar CVL-1 contig15259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31549

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1305--1334
6
5.0
6
100
0
60
33
0
0
66
0.92
5801--5846
22
2.1
22
91
0
74
23
28
26
21
1.99
5877--5920
22
2.0
22
86
0
61
20
25
22
31
1.98
5872--5972
52
1.9
52
89
0
157
25
22
25
25
2.00
5930--5971
22
1.9
22
85
0
57
28
21
26
23
1.99
8574--8605
12
2.7
12
100
0
64
25
43
25
6
1.77
22002--22090
42
2.1
42
87
0
124
26
32
29
11
1.91
24606--24712
33
3.2
32
90
2
160
34
9
15
40
1.80
28356--28443
42
2.1
42
84
0
113
11
27
31
29
1.91

Tables:   1

The End!