Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015239.1 Corchorus capsularis cultivar CVL-1 contig15260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19240

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--591
11
3.5
11
85
10
51
57
2
0
39
1.12
1976--2051
29
2.6
29
93
4
125
46
9
5
39
1.58
2600--2758
54
2.9
54
86
2
221
17
20
32
30
1.95
12941--12977
19
2.0
18
89
5
56
32
21
5
40
1.76
14250--14361
30
3.7
30
84
2
143
26
20
33
19
1.97
19105--19240
49
2.8
46
89
4
130
24
33
12
30
1.92
19124--19240
49
2.4
49
97
0
207
23
34
13
28
1.93

Tables:   1

The End!