Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015241.1 Corchorus capsularis cultivar CVL-1 contig15262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16971

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--194
49
4.0
49
93
4
347
22
32
14
29
1.94
1--183
97
1.9
97
98
0
357
23
33
15
27
1.95
169--227
29
2.0
29
100
0
118
20
28
23
27
1.99
120--272
78
2.0
78
90
0
243
23
31
16
28
1.96
198--600
49
8.2
49
80
3
364
23
30
15
30
1.96
72--319
127
2.0
126
90
2
390
23
31
15
29
1.95
198--494
99
3.0
97
84
3
371
23
31
15
29
1.95
198--651
97
4.7
98
79
4
380
23
29
16
30
1.96
217--651
49
8.9
49
77
4
360
23
29
15
31
1.95
2492--2525
9
3.8
9
88
0
50
85
0
0
14
0.60
16543--16581
14
2.7
14
92
4
60
12
25
0
61
1.31

Tables:   1

The End!