Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015243.1 Corchorus capsularis cultivar CVL-1 contig15264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27278

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501--549
6
8.2
6
75
24
50
0
18
30
51
1.47
504--549
15
3.1
15
75
12
58
0
17
30
52
1.45
16848--16879
2
16.0
2
100
0
64
0
0
50
50
1.00
23031--23079
17
2.9
16
82
8
62
34
20
20
24
1.96
26246--26307
31
2.1
30
85
11
83
41
16
19
22
1.89
26590--26628
15
2.7
15
88
4
53
2
15
2
79
0.95

Tables:   1

The End!