Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015246.1 Corchorus capsularis cultivar CVL-1 contig15267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18851

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3718--3787
27
2.5
28
84
9
90
37
27
17
18
1.93
3917--3956
12
3.3
12
82
0
53
12
32
25
30
1.92
6479--6516
6
6.5
6
96
3
69
55
13
0
31
1.38
9698--9749
10
4.8
10
75
15
50
9
26
50
13
1.72
12365--12450
39
2.1
41
85
8
115
48
10
11
29
1.72
12737--12769
12
2.8
12
86
4
50
54
18
0
27
1.44
18066--18130
18
3.3
18
67
29
51
21
46
24
7
1.77
18047--18130
42
2.0
42
85
0
114
25
44
23
7
1.79

Tables:   1

The End!