Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015249.1 Corchorus capsularis cultivar CVL-1 contig15270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8889

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1467--1540
29
2.6
29
91
2
114
44
29
10
14
1.80
3244--3675
35
12.6
34
83
10
474
34
17
10
38
1.84
3244--3683
70
6.4
70
83
7
530
34
17
10
38
1.83
3316--3404
17
5.6
15
67
20
56
33
16
11
38
1.85
3279--3683
172
2.4
167
84
8
507
34
17
10
38
1.83
4298--4341
19
2.3
19
88
0
61
31
18
2
47
1.61
8827--8864
2
18.5
2
94
5
67
47
2
0
50
1.15

Tables:   1

The End!