Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015253.1 Corchorus capsularis cultivar CVL-1 contig15274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46389

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1522--1558
19
1.9
19
100
0
74
43
21
8
27
1.80
4810--4843
16
2.1
16
94
0
59
67
0
17
14
1.23
4950--4974
6
4.2
6
100
0
50
84
0
16
0
0.63
5447--5479
6
5.8
6
86
13
52
63
0
0
36
0.95
5420--5462
23
2.0
22
81
9
52
41
2
2
53
1.26
5446--5482
16
2.3
16
100
0
74
59
0
0
40
0.97
5674--5946
26
10.7
26
91
3
432
27
35
19
17
1.94
8903--8950
12
4.1
11
78
10
51
31
2
0
66
1.03
12281--12311
14
2.2
14
100
0
62
22
12
22
41
1.88
17876--17910
2
18.0
2
88
5
54
48
0
2
48
1.16
17884--17909
13
2.0
13
100
0
52
53
0
0
46
1.00
17882--17910
15
1.9
15
100
0
58
51
0
0
48
1.00
20071--20102
5
6.4
5
96
0
55
84
15
0
0
0.63
33159--33205
24
2.0
22
92
8
76
65
0
0
34
0.93
38354--38535
93
2.0
93
95
0
328
34
9
15
40
1.80

Tables:   1

The End!