Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015254.1 Corchorus capsularis cultivar CVL-1 contig15275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34265

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9163--9199
19
2.0
18
89
5
56
40
8
21
29
1.82
12691--12733
15
2.9
15
96
0
77
39
9
23
27
1.85
21110--21146
19
2.0
18
89
5
56
40
8
21
29
1.82
22163--22281
36
3.4
35
82
13
156
28
18
6
46
1.74
22184--22291
32
3.2
32
80
14
137
28
17
6
47
1.72
22163--22291
68
1.9
68
91
3
215
28
17
6
47
1.72
22320--22571
36
6.9
36
88
2
351
23
21
10
44
1.83
22316--22568
111
2.3
112
88
2
331
23
21
10
44
1.83
22565--22702
11
12.5
11
82
3
134
19
20
10
50
1.76
22846--22979
42
3.3
41
87
8
186
25
20
11
42
1.85
23108--23137
15
2.1
14
93
6
51
16
26
10
46
1.78
29025--29053
11
2.5
12
94
5
51
34
34
31
0
1.58
31617--31679
32
2.0
32
81
6
74
26
19
12
41
1.87

Tables:   1

The End!