Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015262.1 Corchorus capsularis cultivar CVL-1 contig15283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24461

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
776--809
8
4.1
8
85
7
50
23
2
14
58
1.50
1751--1824
33
2.2
34
90
7
125
10
27
39
22
1.87
1816--1840
12
2.1
12
100
0
50
0
24
44
32
1.54
5544--5569
11
2.4
11
100
0
52
53
7
7
30
1.57
14866--14897
11
2.8
12
81
18
50
46
18
0
34
1.49
16507--16716
105
2.0
105
98
0
402
27
14
23
34
1.93
20139--20173
18
2.0
18
88
5
54
5
14
34
45
1.68
22181--22664
173
2.9
165
82
6
544
30
15
16
37
1.90
22744--22776
12
2.8
12
86
13
50
39
3
0
57
1.14
22920--22951
2
16.0
2
93
0
55
46
0
3
50
1.17
24319--24432
61
1.9
60
90
1
183
30
11
28
28
1.92

Tables:   1

The End!