Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015265.1 Corchorus capsularis cultivar CVL-1 contig15286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10046

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--596
21
2.0
21
90
0
66
21
9
28
40
1.84
2759--2850
22
4.4
22
74
18
97
22
18
4
54
1.61
2853--2958
22
4.9
22
68
16
69
20
20
6
51
1.69
2820--2883
33
1.9
33
84
6
85
21
20
7
50
1.73
2938--2985
15
3.2
15
78
0
51
18
22
6
52
1.68
3000--3076
40
1.9
41
92
7
131
22
19
3
54
1.60
2992--3133
40
3.5
39
79
10
117
23
21
7
47
1.75
3154--3321
38
4.6
37
81
11
193
25
17
7
48
1.74
3168--3312
70
2.1
70
94
0
254
26
17
6
49
1.71
3890--4110
100
2.2
101
90
0
345
37
16
4
41
1.69
3872--4119
50
5.0
50
76
7
229
37
16
4
41
1.69
6504--6547
23
2.0
23
90
4
72
22
4
4
68
1.27
6964--7040
27
2.9
27
92
1
120
41
23
19
15
1.89

Tables:   1

The End!