Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015266.1 Corchorus capsularis cultivar CVL-1 contig15287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18062

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--306
27
2.6
27
95
0
120
44
21
17
15
1.86
3282--3336
28
2.0
28
100
0
110
50
16
14
18
1.77
10439--10655
110
2.0
111
93
0
373
45
10
14
29
1.77
13879--13918
2
20.0
2
94
0
71
50
2
0
47
1.14
15363--15559
99
2.0
99
98
0
385
35
14
14
36
1.86
17016--17158
73
2.0
73
95
0
259
21
27
30
20
1.98
17867--17916
3
16.7
3
91
0
82
38
0
0
62
0.96
17858--17931
6
13.0
6
83
12
50
43
0
0
56
0.99
17863--17931
9
7.7
9
82
6
68
42
0
0
57
0.98

Tables:   1

The End!