Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015270.1 Corchorus capsularis cultivar CVL-1 contig15291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77825

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4257--4305
21
2.3
21
82
6
55
40
16
28
14
1.87
23699--23772
27
2.7
27
89
4
103
45
21
14
17
1.84
43915--44019
33
3.2
33
79
5
122
24
9
20
44
1.81
43968--44055
33
2.7
32
82
8
97
28
7
21
42
1.81
46025--46111
45
2.0
44
90
2
138
22
43
24
9
1.82
46025--46098
22
3.3
22
69
10
60
21
44
25
8
1.79
47144--47173
13
2.4
12
89
10
51
90
0
0
10
0.47
56758--57166
207
2.0
207
95
0
728
29
18
28
22
1.98
58236--58266
14
2.3
14
94
5
55
87
0
0
12
0.55
64935--65050
33
3.5
33
90
2
171
29
9
19
41
1.83
74365--74857
53
9.6
53
84
7
649
45
8
19
26
1.79
74365--74857
204
2.4
198
87
6
668
45
8
19
26
1.79
76125--76186
30
2.1
30
90
0
97
8
29
37
25
1.85

Tables:   1

The End!