Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015271.1 Corchorus capsularis cultivar CVL-1 contig15292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8855

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2870--2898
14
2.1
14
100
0
58
20
6
27
44
1.77
3945--4136
32
6.0
32
81
2
197
54
4
23
17
1.62
4131--4238
9
12.4
9
79
7
107
59
0
25
13
1.41
4142--4243
24
4.0
23
81
12
87
59
0
25
13
1.40
4215--4353
67
2.1
67
89
2
208
46
7
20
25
1.76
5678--5883
68
2.9
71
81
7
222
29
18
7
45
1.76
5678--5883
36
5.8
36
85
7
242
29
18
7
45
1.76
5872--6051
41
4.4
41
88
2
256
22
21
10
46
1.81
5853--6029
82
2.2
82
86
4
232
25
20
9
44
1.81
7701--7748
20
2.3
20
78
3
51
18
8
8
64
1.46
8006--8049
20
2.2
20
91
0
70
56
9
15
18
1.65

Tables:   1

The End!