Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015278.1 Corchorus capsularis cultivar CVL-1 contig15299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13993

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
767--1035
134
2.0
134
99
0
529
21
27
14
36
1.93
12096--12142
13
3.5
13
75
16
51
12
23
0
63
1.28
12202--12249
21
2.3
21
75
7
53
27
27
4
41
1.74
12245--12299
21
2.7
21
82
2
67
20
21
7
50
1.71
12283--12327
14
3.2
14
78
12
56
26
20
6
46
1.75
12382--12449
26
2.6
27
81
6
68
26
19
4
50
1.66
12422--12491
32
2.2
32
84
7
88
21
18
7
52
1.69
12490--12603
42
2.8
41
87
2
167
20
21
5
53
1.65

Tables:   1

The End!