Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015279.1 Corchorus capsularis cultivar CVL-1 contig15300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29738

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--402
24
3.2
25
72
15
67
18
26
2
52
1.58
561--628
26
2.6
27
81
6
68
27
17
4
50
1.65
743--831
32
2.8
32
89
0
133
19
23
4
52
1.64
778--840
16
3.9
16
75
22
69
19
23
4
52
1.65
5995--6031
17
2.2
17
90
0
56
32
16
10
40
1.83
12069--12299
35
6.6
36
89
5
307
33
19
8
38
1.82
12069--12302
106
2.2
105
87
5
339
33
18
8
38
1.82
15887--15930
22
2.0
22
86
0
61
45
13
11
29
1.79
16068--16124
22
2.6
22
80
0
60
36
1
19
42
1.62
16288--16337
22
2.3
21
83
12
66
42
14
10
34
1.78
18721--18815
42
2.3
42
86
0
127
22
23
23
31
1.98
29050--29080
12
2.6
12
94
0
53
19
25
19
35
1.95
29176--29217
6
6.8
6
97
2
75
35
14
0
50
1.43

Tables:   1

The End!