Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015284.1 Corchorus capsularis cultivar CVL-1 contig15305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24180

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1442--2031
198
3.0
197
86
3
789
34
18
13
33
1.90
5348--5379
10
3.1
11
86
13
50
53
0
0
46
1.00
5371--5410
6
6.3
6
83
11
53
60
5
0
35
1.19
5733--5793
2
29.0
2
90
9
95
47
0
4
47
1.23
5733--5793
19
3.2
19
93
6
106
47
0
4
47
1.23
5733--5786
17
3.2
17
97
2
101
48
0
3
48
1.19
5964--6040
40
1.9
40
100
0
154
35
28
12
23
1.92
8345--8378
12
2.8
12
86
0
50
47
2
29
20
1.65
18177--18208
16
1.9
17
93
6
57
50
0
0
50
1.00
19078--19144
31
2.2
31
84
7
84
25
17
26
29
1.98

Tables:   1

The End!