Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015285.1 Corchorus capsularis cultivar CVL-1 contig15306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30948

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1647--1822
85
2.1
86
95
3
320
48
6
9
34
1.62
1867--2021
70
2.2
70
88
3
224
50
1
12
35
1.48
2603--2634
2
15.5
2
93
6
55
46
0
3
50
1.17
3021--3066
23
2.0
23
95
0
83
63
0
2
34
1.07
4155--4217
27
2.3
27
76
7
65
74
7
11
6
1.21
4199--4265
32
2.2
32
86
5
93
73
4
4
17
1.18
7177--7273
30
3.1
30
84
11
124
25
39
26
8
1.84
7177--7257
33
2.5
33
90
5
123
25
37
27
9
1.88
8795--8838
20
2.2
20
84
4
54
13
22
18
45
1.84
14490--14533
20
2.2
20
87
0
61
13
25
18
43
1.86
18780--18819
19
2.1
19
100
0
80
25
15
27
32
1.95
18874--18931
25
2.4
25
94
5
102
20
0
18
60
1.36

Tables:   1

The End!