Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015286.1 Corchorus capsularis cultivar CVL-1 contig15307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45538

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--28
2
14.0
2
100
0
56
50
0
0
50
1.00
7137--7169
3
11.0
3
87
12
50
36
0
0
63
0.95
7137--7173
12
3.0
13
92
7
60
37
0
0
62
0.96
7140--7186
9
5.9
8
78
16
53
38
2
0
59
1.09
7681--7780
50
2.0
50
98
0
191
31
22
7
40
1.80
8055--8082
3
9.3
3
100
0
56
32
0
0
67
0.91
11669--11708
21
1.9
21
85
10
55
22
17
27
32
1.96
24308--24355
17
2.8
17
80
0
51
25
20
18
35
1.95
25741--25772
2
16.0
2
100
0
64
50
0
0
50
1.00
32021--32080
21
2.9
21
76
0
75
31
21
11
35
1.90
42108--42132
11
2.3
11
100
0
50
52
8
20
20
1.71
42205--42267
3
21.3
3
75
15
51
31
6
3
58
1.39
42204--42267
17
3.6
17
82
15
69
31
6
3
59
1.38
43747--43786
19
2.1
19
90
0
62
32
0
52
15
1.43

Tables:   1

The End!