Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015287.1 Corchorus capsularis cultivar CVL-1 contig15308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32952

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13344--13406
26
2.4
26
84
10
76
44
15
14
25
1.84
14216--14260
22
2.0
22
100
0
90
55
0
17
26
1.42
21801--21828
2
14.0
2
100
0
56
0
0
50
50
1.00
23856--23880
2
12.5
2
100
0
50
52
0
0
48
1.00
24534--24602
22
3.1
21
85
8
84
46
8
11
33
1.71
24618--24666
22
2.3
21
89
6
73
44
14
8
32
1.74
24626--24843
22
9.9
22
71
13
137
36
11
15
37
1.83
24652--24707
23
2.5
23
85
8
71
39
7
8
44
1.63
24738--24819
23
3.7
23
83
6
89
36
12
14
36
1.84
24759--24841
23
3.7
23
81
12
77
33
12
16
37
1.86
24696--24856
88
1.8
88
82
5
209
35
11
16
36
1.85
25136--25267
16
8.4
16
76
9
101
34
35
18
10
1.86
32619--32657
2
19.5
2
94
0
69
48
0
2
48
1.15

Tables:   1

The End!