Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015292.1 Corchorus capsularis cultivar CVL-1 contig15313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33921

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
217--261
23
2.0
21
83
8
54
42
2
4
51
1.34
11040--11069
6
5.0
6
91
0
51
3
66
13
16
1.37
11408--11461
26
2.1
26
100
0
108
38
3
7
50
1.48
23177--23203
6
4.5
6
100
0
54
0
14
0
85
0.61
23566--23604
12
3.0
13
88
7
53
48
0
7
43
1.31
23755--23824
31
2.3
31
97
0
131
22
25
20
31
1.98
27361--27459
31
3.3
31
78
8
114
34
18
25
22
1.96
27444--27581
70
2.0
70
100
0
276
22
21
19
36
1.95
27648--27757
54
2.0
54
100
0
220
24
5
21
48
1.71

Tables:   1

The End!