Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015296.1 Corchorus capsularis cultivar CVL-1 contig15317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10417

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3886--3923
14
2.7
14
84
12
51
44
7
13
34
1.72
5467--5587
60
2.0
62
88
3
183
33
20
13
32
1.91
5466--5723
98
2.6
98
92
2
428
32
20
14
32
1.93
5527--5616
38
2.4
38
92
0
144
34
20
14
31
1.92
5625--5754
38
3.4
38
84
4
181
32
20
17
30
1.95
5787--5842
15
3.5
15
81
13
76
30
21
1
46
1.62
5787--5850
16
4.0
17
79
16
75
29
21
3
45
1.67
5875--6021
47
3.1
47
88
3
206
21
27
16
34
1.94
5994--6096
47
2.2
48
82
8
131
24
25
16
33
1.96
6086--6205
60
2.0
61
90
1
188
27
26
11
34
1.91
6141--6205
28
2.4
27
82
7
69
27
27
12
32
1.92
7959--8005
22
2.1
22
92
0
76
19
38
17
25
1.92
9974--10067
49
1.9
49
84
4
127
23
27
14
34
1.94
10224--10381
63
2.5
62
81
6
176
29
22
15
33
1.94
10274--10399
62
2.0
63
83
4
157
28
26
13
30
1.94

Tables:   1

The End!