Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015303.1 Corchorus capsularis cultivar CVL-1 contig15324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24451

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3762--3817
16
3.6
16
76
13
71
8
17
35
37
1.82
4077--4158
42
2.0
42
90
0
128
35
3
20
40
1.70
5350--5401
16
3.2
16
77
0
68
7
11
42
38
1.70
5350--5407
16
3.6
15
73
13
53
6
13
43
36
1.71
7645--7785
31
4.5
31
83
1
167
31
24
23
20
1.98
8229--8291
16
4.1
15
81
6
72
49
33
12
4
1.62
8439--8527
16
5.6
16
80
7
110
39
34
10
15
1.81
8439--8546
32
3.4
31
90
2
162
39
36
10
13
1.79
8534--8585
6
8.7
6
78
14
54
36
48
11
3
1.58
8439--8578
63
2.2
63
84
5
176
39
37
10
12
1.77
10900--10948
26
1.9
25
84
12
64
46
0
0
53
1.00
11116--11167
24
2.1
25
86
10
72
7
17
0
75
1.03
11140--11207
9
7.7
9
71
15
61
4
22
0
73
1.01
11140--11206
18
3.8
17
78
5
80
4
20
0
74
0.99
13943--13969
2
13.5
2
100
0
54
48
0
0
51
1.00
15850--16000
78
1.9
78
91
0
248
50
0
11
37
1.39
15942--16058
58
2.0
58
94
0
207
49
0
11
39
1.38
16429--16459
11
2.8
11
90
0
53
38
19
9
32
1.84
16452--16491
13
3.1
13
85
0
53
25
15
15
45
1.84

Tables:   1

The End!