Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015305.1 Corchorus capsularis cultivar CVL-1 contig15326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34885

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27--672
333
1.9
332
83
5
842
36
17
14
31
1.90
717--896
94
1.9
96
85
4
249
53
3
7
35
1.48
1241--1291
15
3.6
15
69
15
54
54
0
11
33
1.37
1317--1381
30
2.1
31
94
2
114
47
4
20
27
1.69
1595--2039
168
2.7
165
87
3
615
39
15
15
29
1.88
17341--17370
10
3.1
10
95
4
53
93
0
6
0
0.35
33067--33112
21
2.2
21
92
0
74
36
17
8
36
1.81

Tables:   1

The End!