Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015307.1 Corchorus capsularis cultivar CVL-1 contig15328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42017

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222--254
12
2.5
14
90
9
52
12
36
3
48
1.56
2134--2172
20
2.0
20
94
0
69
41
17
10
30
1.83
2368--2397
14
2.1
14
100
0
60
46
16
13
23
1.82
3663--3767
33
3.2
32
81
5
129
24
9
20
45
1.80
3783--3868
33
2.6
33
88
0
127
31
9
17
41
1.81
24723--24764
8
5.8
8
78
21
56
7
28
35
28
1.84
24722--24771
14
3.6
14
100
0
100
6
30
36
28
1.81
41897--41924
1
28.0
1
100
0
56
100
0
0
0
0.00

Tables:   1

The End!