Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015310.1 Corchorus capsularis cultivar CVL-1 contig15331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10434

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--58
19
1.9
19
89
10
58
64
0
5
29
1.15
186--234
15
3.5
15
68
21
52
57
0
8
34
1.29
260--319
31
1.9
32
90
6
97
45
3
20
31
1.67
407--452
18
2.5
18
85
3
56
58
0
2
39
1.10
2118--2163
24
1.9
24
90
0
74
30
36
2
30
1.70
2370--2427
2
29.5
2
77
10
57
46
5
0
48
1.24
7704--7781
2
43.5
2
70
25
59
51
1
1
46
1.17
7703--7786
12
6.1
14
78
15
77
52
1
1
45
1.16
9020--9053
17
1.9
18
94
5
61
23
2
17
55
1.55
10008--10034
14
1.9
14
100
0
54
14
3
7
74
1.18

Tables:   1

The End!