Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015311.1 Corchorus capsularis cultivar CVL-1 contig15332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51728

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
889--913
2
12.5
2
100
0
50
52
0
0
48
1.00
10238--10278
15
2.4
18
84
15
52
0
36
0
63
0.95
12136--12175
14
2.7
15
84
3
55
75
2
22
0
0.93
12140--12175
19
1.9
18
88
5
54
75
2
22
0
0.94
12974--13016
3
14.3
3
100
0
86
67
0
0
32
0.91
13048--13073
2
13.0
2
100
0
52
50
0
0
50
1.00
14450--14660
103
2.0
103
100
0
422
39
15
11
33
1.84
14635--14732
33
3.1
32
75
7
103
14
31
35
18
1.91
14669--14750
33
2.5
33
80
7
87
17
32
32
17
1.93
14979--15004
9
2.9
9
100
0
52
34
7
34
23
1.83
19294--19318
10
2.5
10
100
0
50
24
8
20
48
1.76
21174--21227
22
2.4
23
81
3
65
33
3
7
55
1.45
21448--21488
21
2.0
21
90
0
64
31
9
43
14
1.78
21924--21960
13
2.8
13
87
0
56
16
43
8
32
1.77
21954--22042
41
2.2
39
84
9
124
39
21
10
29
1.86
45090--45181
46
2.0
46
97
0
175
41
13
18
27
1.87

Tables:   1

The End!