Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015315.1 Corchorus capsularis cultivar CVL-1 contig15336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22228

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6411--6453
11
3.9
11
84
0
59
44
6
6
41
1.58
6407--6453
22
2.1
22
92
0
76
44
6
6
42
1.55
7940--7992
20
2.9
18
76
13
54
33
15
0
50
1.44
8613--8660
14
3.4
14
88
11
71
52
4
2
41
1.32
8613--8658
15
3.1
15
90
9
69
54
4
2
39
1.32
12283--12307
13
1.9
13
100
0
50
36
8
16
40
1.77
18109--18360
41
6.1
41
83
5
294
49
11
15
23
1.77
18318--18727
37
11.1
37
81
3
423
46
9
18
25
1.78
18318--18729
111
3.7
111
87
2
544
46
9
18
25
1.78
18717--19583
41
21.1
41
88
3
1178
47
10
20
22
1.80
19018--19083
23
3.1
23
62
28
54
51
13
15
19
1.76
18717--19583
164
5.3
164
90
1
1303
47
10
20
22
1.80
19579--19779
36
5.8
35
82
10
234
43
6
21
28
1.78
19593--19768
68
2.6
68
93
0
289
43
7
22
27
1.79

Tables:   1

The End!