Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015319.1 Corchorus capsularis cultivar CVL-1 contig15340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21766

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
127--253
66
1.9
65
93
1
218
43
9
6
40
1.62
2354--2410
6
9.7
6
79
9
55
68
1
0
29
1.00
2364--2421
14
4.2
14
80
2
73
74
1
0
24
0.92
2362--2415
28
1.9
28
92
0
90
72
1
0
25
0.95
3270--3304
11
3.2
11
83
0
52
77
17
5
0
0.96
9505--9541
19
2.0
18
89
5
56
29
21
8
40
1.82
11515--11605
36
2.6
36
86
8
116
27
10
15
46
1.79
15685--15738
2
27.5
2
81
3
65
44
0
5
50
1.25
15874--15912
3
13.0
3
89
10
62
33
0
0
66
0.92
15876--15912
19
2.0
18
94
5
65
32
0
0
67
0.91
20998--21022
13
1.9
13
100
0
50
16
20
8
56
1.65

Tables:   1

The End!