Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015322.1 Corchorus capsularis cultivar CVL-1 contig15343, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14832

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2055--2522
233
2.0
233
100
0
936
27
27
11
32
1.92
5166--5199
16
2.1
16
100
0
68
38
23
5
32
1.79
6774--6806
12
2.8
12
86
13
50
33
9
15
42
1.78
7393--7781
14
27.3
14
65
20
116
44
5
21
28
1.75
7393--7532
8
19.7
7
67
21
53
42
5
22
30
1.74
7393--7506
22
5.2
22
69
17
85
42
4
21
30
1.72
7393--7790
30
14.0
28
66
20
118
44
6
21
27
1.75
7644--7790
8
18.9
8
72
21
55
43
4
23
28
1.74
7645--7731
16
5.9
15
77
16
67
44
3
21
29
1.69
7661--7756
22
4.5
21
82
10
99
46
2
22
28
1.63
7646--7776
16
8.3
16
72
23
66
44
3
22
29
1.71
7756--7797
22
1.9
22
85
0
57
38
4
23
33
1.76
7830--7917
24
3.8
23
79
5
81
48
3
20
27
1.65
7940--7979
16
2.5
16
91
0
62
45
5
20
30
1.72
9005--9048
8
5.6
8
89
5
72
13
11
0
75
1.06
9005--9048
15
2.8
16
86
6
72
13
11
0
75
1.06
9393--9430
15
2.5
15
87
8
51
18
0
10
71
1.14
9412--9453
21
2.0
21
90
9
68
19
0
0
80
0.70
9413--9455
18
2.4
18
85
11
61
16
0
0
83
0.64
9412--9456
15
3.1
14
81
9
54
20
0
0
80
0.72
9743--9790
3
16.0
3
95
0
87
33
2
0
64
1.05
9858--9894
14
2.7
14
95
4
67
43
5
10
40
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9789--9906
49
2.4
50
94
4
206
36
16
10
37
1.82

Tables:   1

The End!