Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015327.1 Corchorus capsularis cultivar CVL-1 contig15348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16575

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2611--2645
3
12.0
3
93
6
63
68
0
0
31
0.90
2681--2732
27
1.9
28
92
7
90
32
7
11
48
1.68
2866--2900
13
2.7
13
95
0
61
34
14
5
45
1.68
5035--5124
42
2.2
41
92
7
155
32
18
15
33
1.93
10982--11008
2
13.5
2
100
0
54
48
0
0
51
1.00
13660--13690
2
15.5
2
100
0
62
51
0
0
48
1.00
14612--14640
2
15.0
2
92
7
51
51
0
0
48
1.00

Tables:   1

The End!