Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015331.1 Corchorus capsularis cultivar CVL-1 contig15352, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70897

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2261--2285
13
1.9
13
100
0
50
80
0
0
20
0.72
10336--10408
29
2.5
29
81
2
92
17
31
16
34
1.93
10570--10676
29
3.6
30
78
8
103
39
14
28
17
1.90
15674--15698
1
25.0
1
100
0
50
0
0
0
100
0.00
19779--19819
9
4.7
9
85
8
50
0
0
21
78
0.76
25498--25540
11
3.6
11
80
17
50
27
0
44
27
1.55
25502--25530
14
2.1
14
100
0
58
31
0
41
27
1.56
26263--26321
29
2.0
29
100
0
118
30
35
6
27
1.83
35649--35679
1
31.0
1
100
0
62
100
0
0
0
0.00
36916--37075
31
5.5
31
78
13
149
18
21
26
33
1.96
36964--37066
53
1.9
53
90
0
161
17
19
26
36
1.94
43536--43595
30
2.0
30
100
0
120
50
10
13
26
1.73
44269--44310
13
3.3
13
73
6
50
52
28
0
19
1.46
59210--59236
6
4.5
6
100
0
54
14
0
0
85
0.61
59477--59548
30
2.4
29
86
2
90
29
43
9
18
1.81
60520--60554
2
17.5
2
100
0
70
48
0
0
51
1.00
70248--70283
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!