Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015335.1 Corchorus capsularis cultivar CVL-1 contig15356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53597

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12430--12491
19
3.2
19
80
8
70
17
9
24
48
1.77
12900--12965
26
2.5
26
87
7
107
42
3
34
19
1.67
16398--16434
15
2.2
18
86
13
53
70
5
0
24
1.08
16965--16992
6
4.7
6
100
0
56
32
0
53
14
1.41
22642--22685
20
2.2
20
95
0
79
45
11
0
43
1.40
29668--29720
14
3.8
14
75
5
54
41
9
5
43
1.61
29668--29721
21
2.6
21
85
2
74
40
9
5
44
1.60
30285--30330
21
2.1
22
88
4
67
13
0
28
58
1.35
33508--33773
75
3.6
75
89
3
403
12
28
36
22
1.91
52829--52855
12
2.2
12
100
0
54
59
0
7
33
1.25

Tables:   1

The End!