Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015340.1 Corchorus capsularis cultivar CVL-1 contig15361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15198

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417--464
22
2.2
22
85
7
62
18
16
10
54
1.70
1545--1613
35
2.0
35
85
5
95
65
7
2
24
1.32
1568--1631
25
2.7
23
78
9
67
67
9
3
20
1.33
1735--1764
2
15.0
2
100
0
60
50
0
0
50
1.00
11847--11918
31
2.3
32
83
7
94
19
23
8
48
1.76
12126--12185
29
2.1
29
87
6
86
56
5
16
21
1.59

Tables:   1

The End!